I recently shot a series of sunset images for HDR with a 5D MKII. It has the new firmware. I noticed after I started to work up the HDR series, that on almost every image, there was a large red circle, center to the image. Not the normal sun flare I have seen in the past that tends to follow an angle from the sun. I found this issue on pretty much all the shots from this shoot. I was using a 24-70 Canon lens for all the shooting. I did have the stock hood on. ISO was 100. I had taken a large series of shots of a full moon up to 55 sec exposures and didn't notice this effect, however this was before the new firmware was added.
Here is a link to 3 image examples
TestGalleryNo1
Sunset HDR is a normal part of my workflow and I have thousands of images taken with a 1ds MKII in very similar situations and have not seen this type of cast. I feel it's more a cast than flare, but would appreciate others opinions. I have yet to get out and reshoot since I noticed this.
I just realized that Canon is using a new coating on the MKII, Flourine, and wondered if it might have caused such a flare.
Thanks
Paul Caldwell